Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm10222-201ENSMUST00000088336 294 ntBASIC5.24□□□□□ -1.57
Sox1P53783 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sox1P53783 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox1P53783 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Sox1P53783 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.24□□□□□ -1.57
Sox1P53783 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sox1P53783 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox1P53783 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox1P53783 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Sox1P53783 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Sox1P53783 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox1P53783 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Sox1P53783 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.23□□□□□ -1.57
Sox1P53783 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox1P53783 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox1P53783 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox1P53783 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.23□□□□□ -1.57
Sox1P53783 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Gm26075-201ENSMUST00000104062 121 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Gm13378-201ENSMUST00000117483 336 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Gm11813-201ENSMUST00000118586 291 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Gm24784-201ENSMUST00000157640 62 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.23□□□□□ -1.57
Sox1P53783 Gm4222-201ENSMUST00000165784 470 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.23□□□□□ -1.57
Sox1P53783 Gm26219-201ENSMUST00000175216 71 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Gm24464-201ENSMUST00000179697 107 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.23□□□□□ -1.57
Sox1P53783 Gm27699-201ENSMUST00000183553 180 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Gm28468-201ENSMUST00000188536 615 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Gm37503-201ENSMUST00000192088 319 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Gm37746-201ENSMUST00000193249 198 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Gm36954-201ENSMUST00000195362 363 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.23□□□□□ -1.57
Sox1P53783 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox1P53783 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.23□□□□□ -1.57
Sox1P53783 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.23□□□□□ -1.57
Sox1P53783 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox1P53783 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox1P53783 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox1P53783 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox1P53783 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox1P53783 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.23□□□□□ -1.57
Sox1P53783 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox1P53783 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox1P53783 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.23□□□□□ -1.57
Sox1P53783 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Sox1P53783 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sox1P53783 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox1P53783 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
Sox1P53783 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sox1P53783 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sox1P53783 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox1P53783 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox1P53783 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sox1P53783 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sox1P53783 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Sox1P53783 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Sox1P53783 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Sox1P53783 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm11790-201ENSMUST00000119569 455 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm14101-201ENSMUST00000121502 473 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm16358-201ENSMUST00000146046 210 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm23779-201ENSMUST00000157938 64 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm25555-201ENSMUST00000158078 111 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm25520-201ENSMUST00000158389 118 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm25362-201ENSMUST00000158854 105 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm24713-201ENSMUST00000178850 107 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm25448-201ENSMUST00000180065 107 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.22□□□□□ -1.57
Sox1P53783 Gm29479-201ENSMUST00000190352 455 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Sox1P53783 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm43393-201ENSMUST00000200147 194 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm44336-201ENSMUST00000203696 468 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm45365-201ENSMUST00000209489 256 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Sox1P53783 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC5.22□□□□□ -1.57
Sox1P53783 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.22□□□□□ -1.57
Sox1P53783 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Sox1P53783 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox1P53783 Snora52-201ENSMUST00000082732 137 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Gm26263-201ENSMUST00000083281 164 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Sox1P53783 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Sox1P53783 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox1P53783 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.22□□□□□ -1.57
Sox1P53783 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms