Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx1P48377 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.83□□□□□ -1.48
Rfx1P48377 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.82□□□□□ -1.48
Rfx1P48377 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Rfx1P48377 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx1P48377 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.82□□□□□ -1.48
Rfx1P48377 Gm15148-201ENSMUST00000117602 156 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Gm12074-201ENSMUST00000120189 219 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.82□□□□□ -1.48
Rfx1P48377 Mir1970-201ENSMUST00000157839 104 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Gm24546-201ENSMUST00000158652 102 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Gm17148-201ENSMUST00000164702 249 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx1P48377 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx1P48377 Gm21673-201ENSMUST00000186640 436 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC5.82□□□□□ -1.48
Rfx1P48377 Gm21135-201ENSMUST00000189023 436 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Mir6906-201ENSMUST00000198998 58 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Gm44485-201ENSMUST00000199569 137 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx1P48377 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx1P48377 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx1P48377 Gm45387-201ENSMUST00000209792 632 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 AC154603.1-201ENSMUST00000224355 313 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 AC117656.1-201ENSMUST00000225826 339 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Snord42a-201ENSMUST00000082606 65 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Rfx1P48377 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx1P48377 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx1P48377 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.82□□□□□ -1.48
Rfx1P48377 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Rfx1P48377 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx1P48377 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.81□□□□□ -1.48
Rfx1P48377 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx1P48377 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.81□□□□□ -1.48
Rfx1P48377 Gm24951-201ENSMUST00000102182 109 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Rfx1P48377 Gm26156-201ENSMUST00000116999 123 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Gm15752-201ENSMUST00000117427 394 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Gm13451-201ENSMUST00000117649 592 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Gm14220-201ENSMUST00000118114 449 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
Rfx1P48377 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC5.81□□□□□ -1.48
Rfx1P48377 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.81□□□□□ -1.48
Rfx1P48377 Gm22216-201ENSMUST00000157557 114 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Gm22601-201ENSMUST00000157595 250 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Gm22769-201ENSMUST00000158367 98 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Gm16038-201ENSMUST00000159317 193 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Gm9443-201ENSMUST00000188406 816 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx1P48377 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Gm38008-201ENSMUST00000195333 518 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Rfx1P48377 Gm9480-201ENSMUST00000198038 616 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Rfx1P48377 Gm43440-201ENSMUST00000201957 729 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Rfx1P48377 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.81□□□□□ -1.48
Rfx1P48377 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Rfx1P48377 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx1P48377 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx1P48377 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.81□□□□□ -1.48
Rfx1P48377 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.81□□□□□ -1.48
Rfx1P48377 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Rfx1P48377 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Rfx1P48377 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx1P48377 Gm14421-201ENSMUST00000121755 1958 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Rfx1P48377 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx1P48377 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Rfx1P48377 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx1P48377 Gm18432-201ENSMUST00000195568 1451 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Rfx1P48377 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Rfx1P48377 Gm25419-201ENSMUST00000104215 191 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm12871-201ENSMUST00000118758 438 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm13228-201ENSMUST00000118937 634 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm14980-201ENSMUST00000121247 736 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC5.8□□□□□ -1.48
Rfx1P48377 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.8□□□□□ -1.48
Rfx1P48377 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms