Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm16445-201ENSMUST00000120399 714 ntBASIC3.4□□□□□ -1.87
Col2a1P28481 Gm11321-201ENSMUST00000121257 902 ntBASIC3.4□□□□□ -1.87
Col2a1P28481 Gm23957-201ENSMUST00000157209 90 ntBASIC3.4□□□□□ -1.87
Col2a1P28481 Gm25392-201ENSMUST00000157335 297 ntBASIC3.4□□□□□ -1.87
Col2a1P28481 Gm24681-201ENSMUST00000158760 107 ntBASIC3.4□□□□□ -1.87
Col2a1P28481 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC3.4□□□□□ -1.87
Col2a1P28481 Trbv7-201ENSMUST00000193339 402 ntBASIC3.4□□□□□ -1.87
Col2a1P28481 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.4□□□□□ -1.87
Col2a1P28481 Gm32222-201ENSMUST00000203296 298 ntBASIC3.4□□□□□ -1.87
Col2a1P28481 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.4□□□□□ -1.87
Col2a1P28481 Gm20946-201ENSMUST00000212367 461 ntBASIC3.4□□□□□ -1.87
Col2a1P28481 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC3.4□□□□□ -1.87
Col2a1P28481 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.4□□□□□ -1.87
Col2a1P28481 AC159293.2-201ENSMUST00000222289 424 ntBASIC3.4□□□□□ -1.87
Col2a1P28481 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.4□□□□□ -1.87
Col2a1P28481 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Col2a1P28481 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
Col2a1P28481 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col2a1P28481 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Col2a1P28481 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col2a1P28481 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col2a1P28481 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col2a1P28481 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col2a1P28481 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 Gm5754-201ENSMUST00000118774 892 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 Gm4732-201ENSMUST00000118778 473 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 Gm4910-201ENSMUST00000119605 366 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col2a1P28481 Gm25432-201ENSMUST00000158284 66 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.39□□□□□ -1.87
Col2a1P28481 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col2a1P28481 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC3.39□□□□□ -1.87
Col2a1P28481 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC3.39□□□□□ -1.87
Col2a1P28481 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col2a1P28481 Gm18692-201ENSMUST00000193047 511 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 Gm42578-201ENSMUST00000199960 194 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Col2a1P28481 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.39□□□□□ -1.87
Col2a1P28481 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col2a1P28481 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col2a1P28481 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col2a1P28481 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Col2a1P28481 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.38□□□□□ -1.87
Col2a1P28481 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col2a1P28481 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col2a1P28481 Gm14971-201ENSMUST00000117980 663 ntBASIC3.38□□□□□ -1.87
Col2a1P28481 Gm15225-201ENSMUST00000120449 1017 ntBASIC3.38□□□□□ -1.87
Col2a1P28481 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC3.38□□□□□ -1.87
Col2a1P28481 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.38□□□□□ -1.87
Col2a1P28481 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.38□□□□□ -1.87
Col2a1P28481 Gm24240-201ENSMUST00000157785 135 ntBASIC3.38□□□□□ -1.87
Col2a1P28481 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.38□□□□□ -1.87
Col2a1P28481 Gm27505-201ENSMUST00000185071 110 ntBASIC3.38□□□□□ -1.87
Col2a1P28481 Gm42516-201ENSMUST00000198691 767 ntBASIC3.38□□□□□ -1.87
Col2a1P28481 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Col2a1P28481 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.38□□□□□ -1.87
Col2a1P28481 Gm45814-201ENSMUST00000212646 775 ntBASIC3.38□□□□□ -1.87
Col2a1P28481 Gm21089-201ENSMUST00000215843 325 ntBASIC3.38□□□□□ -1.87
Col2a1P28481 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.38□□□□□ -1.87
Col2a1P28481 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Col2a1P28481 Gm4945-201ENSMUST00000075152 453 ntBASIC3.38□□□□□ -1.87
Col2a1P28481 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Col2a1P28481 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Col2a1P28481 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col2a1P28481 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.38□□□□□ -1.87
Col2a1P28481 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Col2a1P28481 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Col2a1P28481 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.38□□□□□ -1.87
Col2a1P28481 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col2a1P28481 Gm24142-201ENSMUST00000101960 107 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 Gm26983-201ENSMUST00000182051 388 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 Mir6374-201ENSMUST00000184003 107 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 Gm28060-201ENSMUST00000191554 189 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 Gm17937-201ENSMUST00000197908 742 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 Gm6590-201ENSMUST00000203343 687 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.37□□□□□ -1.87
Col2a1P28481 Gm44845-201ENSMUST00000208773 335 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 Gm18193-201ENSMUST00000210017 772 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC3.37□□□□□ -1.87
Col2a1P28481 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Col2a1P28481 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Col2a1P28481 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Col2a1P28481 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col2a1P28481 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col2a1P28481 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col2a1P28481 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.37□□□□□ -1.87
Col2a1P28481 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col2a1P28481 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col2a1P28481 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col2a1P28481 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Col2a1P28481 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms