Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm18698-201ENSMUST00000192327 668 ntBASIC3.32□□□□□ -1.88
Col1a1P11087 Gm37007-201ENSMUST00000194234 319 ntBASIC3.32□□□□□ -1.88
Col1a1P11087 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col1a1P11087 Gm45710-201ENSMUST00000212847 215 ntBASIC3.32□□□□□ -1.88
Col1a1P11087 Gm4017-201ENSMUST00000084813 338 ntBASIC3.32□□□□□ -1.88
Col1a1P11087 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col1a1P11087 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col1a1P11087 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col1a1P11087 Gm23766-201ENSMUST00000103894 80 ntBASIC3.31□□□□□ -1.88
Col1a1P11087 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.31□□□□□ -1.88
Col1a1P11087 Gm22099-201ENSMUST00000157925 123 ntBASIC3.31□□□□□ -1.88
Col1a1P11087 Gm22961-201ENSMUST00000157964 106 ntBASIC3.31□□□□□ -1.88
Col1a1P11087 Gm22666-201ENSMUST00000158717 164 ntBASIC3.31□□□□□ -1.88
Col1a1P11087 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.31□□□□□ -1.88
Col1a1P11087 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col1a1P11087 Gm28534-201ENSMUST00000187744 676 ntBASIC3.31□□□□□ -1.88
Col1a1P11087 Gm29365-201ENSMUST00000189461 699 ntBASIC3.31□□□□□ -1.88
Col1a1P11087 Gm19086-201ENSMUST00000190772 665 ntBASIC3.31□□□□□ -1.88
Col1a1P11087 Gm45013-201ENSMUST00000206883 178 ntBASIC3.31□□□□□ -1.88
Col1a1P11087 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.31□□□□□ -1.88
Col1a1P11087 Gm18921-201ENSMUST00000221798 366 ntBASIC3.31□□□□□ -1.88
Col1a1P11087 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col1a1P11087 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col1a1P11087 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.31□□□□□ -1.88
Col1a1P11087 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col1a1P11087 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col1a1P11087 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col1a1P11087 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col1a1P11087 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col1a1P11087 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col1a1P11087 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.3□□□□□ -1.88
Col1a1P11087 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col1a1P11087 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col1a1P11087 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col1a1P11087 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col1a1P11087 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.3□□□□□ -1.88
Col1a1P11087 Gm12617-201ENSMUST00000121268 381 ntBASIC3.3□□□□□ -1.88
Col1a1P11087 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.3□□□□□ -1.88
Col1a1P11087 Gm25863-201ENSMUST00000158249 329 ntBASIC3.3□□□□□ -1.88
Col1a1P11087 Gm21959-201ENSMUST00000178439 452 ntBASIC3.3□□□□□ -1.88
Col1a1P11087 Gm26933-201ENSMUST00000182320 827 ntBASIC3.3□□□□□ -1.88
Col1a1P11087 Gm37533-201ENSMUST00000193848 545 ntBASIC3.3□□□□□ -1.88
Col1a1P11087 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.3□□□□□ -1.88
Col1a1P11087 Gm44308-201ENSMUST00000197080 99 ntBASIC3.3□□□□□ -1.88
Col1a1P11087 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col1a1P11087 AC163621.2-201ENSMUST00000222229 682 ntBASIC3.3□□□□□ -1.88
Col1a1P11087 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col1a1P11087 Gm18189-201ENSMUST00000218153 1951 ntBASIC3.3□□□□□ -1.88
Col1a1P11087 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col1a1P11087 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Col1a1P11087 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col1a1P11087 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.29□□□□□ -1.88
Col1a1P11087 Gm6374-201ENSMUST00000159051 788 ntBASIC3.29□□□□□ -1.88
Col1a1P11087 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col1a1P11087 Gm28594-201ENSMUST00000187022 661 ntBASIC3.29□□□□□ -1.88
Col1a1P11087 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC3.29□□□□□ -1.88
Col1a1P11087 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col1a1P11087 Gm23377-201ENSMUST00000082943 126 ntBASIC3.29□□□□□ -1.88
Col1a1P11087 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.29□□□□□ -1.88
Col1a1P11087 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.29□□□□□ -1.88
Col1a1P11087 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col1a1P11087 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col1a1P11087 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col1a1P11087 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Gm43264-201ENSMUST00000202284 325 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Gm6796-201ENSMUST00000211919 243 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col1a1P11087 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col1a1P11087 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col1a1P11087 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
Col1a1P11087 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.28□□□□□ -1.88
Col1a1P11087 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Col1a1P11087 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col1a1P11087 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Col1a1P11087 Gm11221-201ENSMUST00000117230 597 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Gm14655-201ENSMUST00000120124 578 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Gm23895-201ENSMUST00000158108 160 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Gm24075-201ENSMUST00000158175 72 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Mir3075-201ENSMUST00000175340 85 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Snord93-201ENSMUST00000175580 71 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Gm24465-201ENSMUST00000178398 107 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col1a1P11087 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.28□□□□□ -1.88
Col1a1P11087 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col1a1P11087 Gm29148-201ENSMUST00000188140 336 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col1a1P11087 Gm2979-201ENSMUST00000193442 463 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col1a1P11087 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Gm44844-201ENSMUST00000207242 336 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Gm45814-201ENSMUST00000212646 775 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col1a1P11087 Gm22622-201ENSMUST00000082870 129 ntBASIC3.28□□□□□ -1.88
Col1a1P11087 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.27□□□□□ -1.89
Col1a1P11087 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col1a1P11087 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Col1a1P11087 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col1a1P11087 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms