Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm29747-201ENSMUST00000194764 585 ntBASIC3.43□□□□□ -1.86
Hoxa9P09631 Gm43295-201ENSMUST00000201439 412 ntBASIC3.43□□□□□ -1.86
Hoxa9P09631 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.43□□□□□ -1.86
Hoxa9P09631 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.43□□□□□ -1.86
Hoxa9P09631 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.43□□□□□ -1.86
Hoxa9P09631 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.43□□□□□ -1.86
Hoxa9P09631 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.43□□□□□ -1.86
Hoxa9P09631 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.43□□□□□ -1.86
Hoxa9P09631 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Hoxa9P09631 Gm22043-201ENSMUST00000082993 158 ntBASIC3.43□□□□□ -1.86
Hoxa9P09631 Gm23455-201ENSMUST00000083331 100 ntBASIC3.43□□□□□ -1.86
Hoxa9P09631 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.43□□□□□ -1.86
Hoxa9P09631 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Hoxa9P09631 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.43□□□□□ -1.86
Hoxa9P09631 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Hoxa9P09631 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Hoxa9P09631 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Hoxa9P09631 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Hoxa9P09631 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Hoxa9P09631 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Hoxa9P09631 Mir291a-201ENSMUST00000104815 82 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm13803-201ENSMUST00000117547 489 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm23183-201ENSMUST00000122595 323 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm24627-201ENSMUST00000122764 138 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm7846-201ENSMUST00000145844 274 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm4479-201ENSMUST00000178807 171 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm29104-201ENSMUST00000186304 222 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm19280-201ENSMUST00000190191 205 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm8242-202ENSMUST00000193056 475 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm37085-201ENSMUST00000193780 196 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm19620-201ENSMUST00000195972 434 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm5983-201ENSMUST00000197739 770 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm7946-201ENSMUST00000203326 958 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm44865-201ENSMUST00000207240 531 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm6230-201ENSMUST00000208077 780 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm7624-201ENSMUST00000209702 435 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC3.42□□□□□ -1.86
Hoxa9P09631 CT009764.1-201ENSMUST00000222260 483 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Hoxa9P09631 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxa9P09631 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Hoxa9P09631 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Hoxa9P09631 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.42□□□□□ -1.86
Hoxa9P09631 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Hoxa9P09631 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxa9P09631 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm22023-201ENSMUST00000104354 130 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm15854-201ENSMUST00000118879 808 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm14810-201ENSMUST00000121628 486 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm16331-201ENSMUST00000144274 498 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm24537-201ENSMUST00000157950 102 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm25438-201ENSMUST00000158281 110 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm16569-201ENSMUST00000160526 314 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm3123-201ENSMUST00000163480 480 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm22910-201ENSMUST00000178568 132 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm28390-201ENSMUST00000185212 700 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm37428-201ENSMUST00000193886 137 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm32447-201ENSMUST00000194265 697 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm17937-201ENSMUST00000197908 742 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm35876-201ENSMUST00000205044 459 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm45312-201ENSMUST00000210566 311 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm36247-201ENSMUST00000211834 285 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxa9P09631 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.41□□□□□ -1.86
Hoxa9P09631 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxa9P09631 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Hoxa9P09631 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hoxa9P09631 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.41□□□□□ -1.86
Hoxa9P09631 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Hoxa9P09631 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Hoxa9P09631 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Hoxa9P09631 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Hoxa9P09631 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.4□□□□□ -1.86
Hoxa9P09631 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Hoxa9P09631 Gm14786-201ENSMUST00000117127 944 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms