Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm5060-201ENSMUST00000120072 599 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm13406-201ENSMUST00000121991 256 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vti1aO89116 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.28□□□□□ -1.56
Vti1aO89116 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.28□□□□□ -1.56
Vti1aO89116 Gm25058-201ENSMUST00000157365 128 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm24419-201ENSMUST00000157875 332 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm26468-201ENSMUST00000158644 106 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm8338-201ENSMUST00000163928 363 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vti1aO89116 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Vti1aO89116 Gm27875-201ENSMUST00000184425 123 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.28□□□□□ -1.56
Vti1aO89116 Gm29490-201ENSMUST00000190923 342 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm38044-201ENSMUST00000192964 487 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm2147-201ENSMUST00000193588 639 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.28□□□□□ -1.56
Vti1aO89116 Gm38019-201ENSMUST00000195133 380 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Vti1aO89116 Gm42428-201ENSMUST00000198677 302 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm43710-201ENSMUST00000199583 452 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm44261-201ENSMUST00000203337 209 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm44295-201ENSMUST00000203805 437 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm44648-201ENSMUST00000208267 329 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm18507-201ENSMUST00000218855 525 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm25853-201ENSMUST00000082793 132 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vti1aO89116 Gm38388-201ENSMUST00000195569 1430 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Vti1aO89116 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.28□□□□□ -1.56
Vti1aO89116 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Vti1aO89116 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Vti1aO89116 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Vti1aO89116 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Vti1aO89116 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Vti1aO89116 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Vti1aO89116 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
Vti1aO89116 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Vti1aO89116 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Vti1aO89116 Mir92b-201ENSMUST00000102300 83 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Vti1aO89116 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.27□□□□□ -1.57
Vti1aO89116 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Vti1aO89116 Gm15195-201ENSMUST00000118775 263 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Gm11196-201ENSMUST00000119052 395 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Gm24371-201ENSMUST00000122662 267 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Gm26348-201ENSMUST00000157528 240 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Gm24690-201ENSMUST00000157759 97 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Gm26085-201ENSMUST00000157900 116 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Gm16490-201ENSMUST00000165299 351 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Gm25397-201ENSMUST00000176951 92 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Vti1aO89116 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.27□□□□□ -1.57
Vti1aO89116 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Gm42643-201ENSMUST00000200504 279 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Gm7957-201ENSMUST00000207404 2602 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Vti1aO89116 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Vti1aO89116 Gm4017-201ENSMUST00000084813 338 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Vti1aO89116 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Vti1aO89116 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Gm44789-201ENSMUST00000207195 3101 ntBASIC5.27□□□□□ -1.57
Vti1aO89116 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Vti1aO89116 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Vti1aO89116 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Vti1aO89116 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Vti1aO89116 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Vti1aO89116 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.26□□□□□ -1.57
Vti1aO89116 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Vti1aO89116 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.26□□□□□ -1.57
Vti1aO89116 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Vti1aO89116 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Vti1aO89116 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Vti1aO89116 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Vti1aO89116 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Vti1aO89116 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Vti1aO89116 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Vti1aO89116 Gm13082-201ENSMUST00000118877 561 ntBASIC5.26□□□□□ -1.57
Vti1aO89116 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.26□□□□□ -1.57
Vti1aO89116 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Vti1aO89116 Gm25292-201ENSMUST00000122797 322 ntBASIC5.26□□□□□ -1.57
Vti1aO89116 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC5.26□□□□□ -1.57
Vti1aO89116 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Vti1aO89116 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.26□□□□□ -1.57
Vti1aO89116 Gm25883-201ENSMUST00000157781 271 ntBASIC5.26□□□□□ -1.57
Vti1aO89116 Gm24192-201ENSMUST00000157978 145 ntBASIC5.26□□□□□ -1.57
Vti1aO89116 Gm23318-201ENSMUST00000158000 108 ntBASIC5.26□□□□□ -1.57
Vti1aO89116 Gm22136-201ENSMUST00000158751 268 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms