Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.12□□□□□ -1.91
CopeO89079 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.12□□□□□ -1.91
CopeO89079 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.12□□□□□ -1.91
CopeO89079 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.12□□□□□ -1.91
CopeO89079 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.12□□□□□ -1.91
CopeO89079 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CopeO89079 Gm25202-201ENSMUST00000082838 191 ntBASIC3.12□□□□□ -1.91
CopeO89079 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CopeO89079 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CopeO89079 Gm11905-201ENSMUST00000117653 678 ntBASIC3.11□□□□□ -1.91
CopeO89079 Gm15001-201ENSMUST00000117657 795 ntBASIC3.11□□□□□ -1.91
CopeO89079 Gm7363-201ENSMUST00000119883 399 ntBASIC3.11□□□□□ -1.91
CopeO89079 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CopeO89079 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.11□□□□□ -1.91
CopeO89079 Gm23213-201ENSMUST00000122715 313 ntBASIC3.11□□□□□ -1.91
CopeO89079 Gm20773-201ENSMUST00000178940 681 ntBASIC3.11□□□□□ -1.91
CopeO89079 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
CopeO89079 Gm43746-201ENSMUST00000200028 317 ntBASIC3.11□□□□□ -1.91
CopeO89079 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.11□□□□□ -1.91
CopeO89079 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.11□□□□□ -1.91
CopeO89079 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CopeO89079 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CopeO89079 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CopeO89079 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CopeO89079 Gm5185-201ENSMUST00000080271 619 ntBASIC3.11□□□□□ -1.91
CopeO89079 Gm22245-201ENSMUST00000082479 103 ntBASIC3.11□□□□□ -1.91
CopeO89079 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.11□□□□□ -1.91
CopeO89079 Gm8074-201ENSMUST00000095071 252 ntBASIC3.11□□□□□ -1.91
CopeO89079 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CopeO89079 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CopeO89079 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CopeO89079 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CopeO89079 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CopeO89079 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CopeO89079 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.1□□□□□ -1.91
CopeO89079 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CopeO89079 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CopeO89079 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CopeO89079 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.1□□□□□ -1.91
CopeO89079 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CopeO89079 Gm13076-201ENSMUST00000118041 204 ntBASIC3.1□□□□□ -1.91
CopeO89079 Gm14903-201ENSMUST00000122435 537 ntBASIC3.1□□□□□ -1.91
CopeO89079 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.1□□□□□ -1.91
CopeO89079 Gm26277-201ENSMUST00000157097 152 ntBASIC3.1□□□□□ -1.91
CopeO89079 Gm26585-201ENSMUST00000180890 630 ntBASIC3.1□□□□□ -1.91
CopeO89079 Mir6943-201ENSMUST00000185186 66 ntBASIC3.1□□□□□ -1.91
CopeO89079 Gm43198-201ENSMUST00000200927 326 ntBASIC3.1□□□□□ -1.91
CopeO89079 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.1□□□□□ -1.91
CopeO89079 Gm19244-201ENSMUST00000204340 253 ntBASIC3.1□□□□□ -1.91
CopeO89079 Gm44157-201ENSMUST00000204720 410 ntBASIC3.1□□□□□ -1.91
CopeO89079 Gm19126-201ENSMUST00000207896 509 ntBASIC3.1□□□□□ -1.91
CopeO89079 Gm45189-201ENSMUST00000208567 363 ntBASIC3.1□□□□□ -1.91
CopeO89079 Gm7786-201ENSMUST00000210494 436 ntBASIC3.1□□□□□ -1.91
CopeO89079 Gm6841-201ENSMUST00000220602 598 ntBASIC3.1□□□□□ -1.91
CopeO89079 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.1□□□□□ -1.91
CopeO89079 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.1□□□□□ -1.91
CopeO89079 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
CopeO89079 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CopeO89079 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CopeO89079 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CopeO89079 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.09□□□□□ -1.91
CopeO89079 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.09□□□□□ -1.91
CopeO89079 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CopeO89079 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.09□□□□□ -1.91
CopeO89079 Gm11876-201ENSMUST00000120002 269 ntBASIC3.09□□□□□ -1.91
CopeO89079 Gm22208-201ENSMUST00000122658 110 ntBASIC3.09□□□□□ -1.91
CopeO89079 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC3.09□□□□□ -1.91
CopeO89079 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CopeO89079 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CopeO89079 Gm23583-201ENSMUST00000158533 289 ntBASIC3.09□□□□□ -1.91
CopeO89079 Mir6899-201ENSMUST00000184798 64 ntBASIC3.09□□□□□ -1.91
CopeO89079 Mir6933-201ENSMUST00000184982 81 ntBASIC3.09□□□□□ -1.91
CopeO89079 Gm1833-201ENSMUST00000191608 682 ntBASIC3.09□□□□□ -1.91
CopeO89079 Gm36943-201ENSMUST00000194422 282 ntBASIC3.09□□□□□ -1.91
CopeO89079 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.09□□□□□ -1.91
CopeO89079 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.09□□□□□ -1.91
CopeO89079 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.09□□□□□ -1.91
CopeO89079 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC3.09□□□□□ -1.91
CopeO89079 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.09□□□□□ -1.91
CopeO89079 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CopeO89079 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
CopeO89079 Mir21a-201ENSMUST00000083521 92 ntBASIC3.09□□□□□ -1.91
CopeO89079 Mir184-201ENSMUST00000083662 69 ntBASIC3.09□□□□□ -1.91
CopeO89079 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.09□□□□□ -1.92
CopeO89079 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CopeO89079 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.09□□□□□ -1.92
CopeO89079 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CopeO89079 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CopeO89079 Gm23716-201ENSMUST00000157348 144 ntBASIC3.08□□□□□ -1.92
CopeO89079 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CopeO89079 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CopeO89079 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CopeO89079 Gm43393-201ENSMUST00000200147 194 ntBASIC3.08□□□□□ -1.92
CopeO89079 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.08□□□□□ -1.92
CopeO89079 Gm20039-201ENSMUST00000210329 394 ntBASIC3.08□□□□□ -1.92
CopeO89079 Gm5649-201ENSMUST00000217918 951 ntBASIC3.08□□□□□ -1.92
CopeO89079 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.08□□□□□ -1.92
CopeO89079 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.08□□□□□ -1.92
CopeO89079 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CopeO89079 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms