Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC2.77□□□□□ -1.97
Col5a1O88207 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC2.77□□□□□ -1.97
Col5a1O88207 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.77□□□□□ -1.97
Col5a1O88207 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm18617-201ENSMUST00000222311 259 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.77□□□□□ -1.97
Col5a1O88207 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
Col5a1O88207 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col5a1O88207 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col5a1O88207 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col5a1O88207 AC124562.2-201ENSMUST00000223888 2313 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm22782-201ENSMUST00000104082 132 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm22764-201ENSMUST00000158370 92 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm25048-201ENSMUST00000158598 91 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm28500-201ENSMUST00000190286 151 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm2719-201ENSMUST00000191929 444 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm37533-201ENSMUST00000193848 545 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm38356-201ENSMUST00000194313 408 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm44607-201ENSMUST00000205611 1090 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col5a1O88207 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm5347-201ENSMUST00000210542 2327 ntBASIC2.76□□□□□ -1.97
Col5a1O88207 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Col5a1O88207 Mir3076-201ENSMUST00000175415 60 ntBASIC2.76□□□□□ -1.97
Col5a1O88207 Gm19694-201ENSMUST00000192364 505 ntBASIC2.76□□□□□ -1.97
Col5a1O88207 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.76□□□□□ -1.97
Col5a1O88207 Gm18660-201ENSMUST00000199542 629 ntBASIC2.76□□□□□ -1.97
Col5a1O88207 Gm43746-201ENSMUST00000200028 317 ntBASIC2.76□□□□□ -1.97
Col5a1O88207 Gm45259-201ENSMUST00000209217 1006 ntBASIC2.76□□□□□ -1.97
Col5a1O88207 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Col5a1O88207 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.76□□□□□ -1.97
Col5a1O88207 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col5a1O88207 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Col5a1O88207 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Col5a1O88207 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col5a1O88207 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col5a1O88207 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.76□□□□□ -1.97
Col5a1O88207 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col5a1O88207 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col5a1O88207 Gm25529-201ENSMUST00000104850 92 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.75□□□□□ -1.97
Col5a1O88207 Gm23960-201ENSMUST00000157206 131 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Col5a1O88207 Gm37946-201ENSMUST00000192064 347 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm37007-201ENSMUST00000194234 319 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC2.75□□□□□ -1.97
Col5a1O88207 Gm45778-201ENSMUST00000211959 153 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col5a1O88207 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col5a1O88207 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC2.75□□□□□ -1.97
Col5a1O88207 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col5a1O88207 Mir26a-1-201ENSMUST00000083579 90 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm24446-201ENSMUST00000083982 156 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col5a1O88207 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col5a1O88207 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Col5a1O88207 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Col5a1O88207 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm38260-201ENSMUST00000193573 3995 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Col5a1O88207 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Col5a1O88207 Gm25377-201ENSMUST00000104334 129 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Col5a1O88207 Gm15061-201ENSMUST00000121076 1046 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm15733-201ENSMUST00000132957 242 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Col5a1O88207 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col5a1O88207 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Col5a1O88207 Gm28628-201ENSMUST00000187006 264 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm28629-201ENSMUST00000187309 263 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm43104-201ENSMUST00000197234 311 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm44157-201ENSMUST00000204720 410 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm21112-201ENSMUST00000212224 578 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Gm7760-201ENSMUST00000212265 578 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.75□□□□□ -1.97
Col5a1O88207 AC158388.1-201ENSMUST00000225441 256 ntBASIC2.75□□□□□ -1.97
Col5a1O88207 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col5a1O88207 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col5a1O88207 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC2.74□□□□□ -1.97
Col5a1O88207 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col5a1O88207 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col5a1O88207 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col5a1O88207 Gm26341-201ENSMUST00000104561 134 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms