Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Cacna1bO55017 Gm13788-201ENSMUST00000120767 601 ntBASIC2.68□□□□□ -1.98
Cacna1bO55017 Gm14506-201ENSMUST00000121165 536 ntBASIC2.68□□□□□ -1.98
Cacna1bO55017 Gm13406-201ENSMUST00000121991 256 ntBASIC2.68□□□□□ -1.98
Cacna1bO55017 Mir1903-201ENSMUST00000122574 80 ntBASIC2.68□□□□□ -1.98
Cacna1bO55017 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Cacna1bO55017 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.68□□□□□ -1.98
Cacna1bO55017 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC2.68□□□□□ -1.98
Cacna1bO55017 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.68□□□□□ -1.98
Cacna1bO55017 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC2.68□□□□□ -1.98
Cacna1bO55017 Gm25636-201ENSMUST00000082666 133 ntBASIC2.68□□□□□ -1.98
Cacna1bO55017 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Cacna1bO55017 Gm36298-201ENSMUST00000223394 1732 ntBASIC2.68□□□□□ -1.98
Cacna1bO55017 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Cacna1bO55017 Gm43826-201ENSMUST00000199604 2612 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Cacna1bO55017 Gm22214-201ENSMUST00000157563 172 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.67□□□□□ -1.98
Cacna1bO55017 Gm2436-201ENSMUST00000219562 774 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC2.67□□□□□ -1.98
Cacna1bO55017 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Cacna1bO55017 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Cacna1bO55017 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
Cacna1bO55017 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Cacna1bO55017 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
Cacna1bO55017 AC135119.1-201ENSMUST00000227935 3717 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
Cacna1bO55017 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cacna1bO55017 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Cacna1bO55017 Gm6797-201ENSMUST00000119440 512 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 Gm14578-201ENSMUST00000122166 391 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Cacna1bO55017 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 Gm45246-201ENSMUST00000210820 367 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.67□□□□□ -1.98
Cacna1bO55017 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Cacna1bO55017 Snora31-201ENSMUST00000083213 130 ntBASIC2.67□□□□□ -1.98
Cacna1bO55017 Gm43736-201ENSMUST00000196377 2281 ntBASIC2.66□□□□□ -1.98
Cacna1bO55017 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Cacna1bO55017 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Cacna1bO55017 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.66□□□□□ -1.98
Cacna1bO55017 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
Cacna1bO55017 Gm13155-201ENSMUST00000119277 646 ntBASIC2.66□□□□□ -1.98
Cacna1bO55017 Gm8178-201ENSMUST00000121570 646 ntBASIC2.66□□□□□ -1.98
Cacna1bO55017 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC2.66□□□□□ -1.98
Cacna1bO55017 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC2.66□□□□□ -1.98
Cacna1bO55017 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Cacna1bO55017 Gm38008-201ENSMUST00000195333 518 ntBASIC2.66□□□□□ -1.98
Cacna1bO55017 Gm44490-201ENSMUST00000198566 127 ntBASIC2.66□□□□□ -1.98
Cacna1bO55017 Gm44212-201ENSMUST00000205016 897 ntBASIC2.66□□□□□ -1.98
Cacna1bO55017 Gm6230-201ENSMUST00000208077 780 ntBASIC2.66□□□□□ -1.98
Cacna1bO55017 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Cacna1bO55017 Gm44682-201ENSMUST00000208501 2614 ntBASIC2.66□□□□□ -1.98
Cacna1bO55017 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Cacna1bO55017 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC2.65□□□□□ -1.98
Cacna1bO55017 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Cacna1bO55017 Gm12954-201ENSMUST00000118610 611 ntBASIC2.65□□□□□ -1.98
Cacna1bO55017 Mir7013-201ENSMUST00000183540 72 ntBASIC2.65□□□□□ -1.98
Cacna1bO55017 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC2.65□□□□□ -1.98
Cacna1bO55017 n-R5s205-201ENSMUST00000083149 125 ntBASIC2.65□□□□□ -1.98
Cacna1bO55017 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Cacna1bO55017 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
Cacna1bO55017 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Cacna1bO55017 Gm13122-201ENSMUST00000118380 453 ntBASIC2.65□□□□□ -1.99
Cacna1bO55017 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.65□□□□□ -1.99
Cacna1bO55017 Gm22988-201ENSMUST00000122759 144 ntBASIC2.65□□□□□ -1.99
Cacna1bO55017 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC2.65□□□□□ -1.99
Cacna1bO55017 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC2.65□□□□□ -1.99
Cacna1bO55017 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Cacna1bO55017 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC2.65□□□□□ -1.99
Cacna1bO55017 Gm6649-201ENSMUST00000199743 1165 ntBASIC2.65□□□□□ -1.99
Cacna1bO55017 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC2.65□□□□□ -1.99
Cacna1bO55017 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.65□□□□□ -1.99
Cacna1bO55017 Gm6195-201ENSMUST00000063059 357 ntBASIC2.65□□□□□ -1.99
Cacna1bO55017 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Cacna1bO55017 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Cacna1bO55017 Gm42927-201ENSMUST00000200624 3841 ntBASIC2.65□□□□□ -1.99
Cacna1bO55017 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.65□□□□□ -1.99
Cacna1bO55017 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Cacna1bO55017 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC2.64□□□□□ -1.99
Cacna1bO55017 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cacna1bO55017 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cacna1bO55017 Gm27369-201ENSMUST00000185182 71 ntBASIC2.64□□□□□ -1.99
Cacna1bO55017 Gm37111-201ENSMUST00000193250 634 ntBASIC2.64□□□□□ -1.99
Cacna1bO55017 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Cacna1bO55017 Gm18327-201ENSMUST00000202426 830 ntBASIC2.64□□□□□ -1.99
Cacna1bO55017 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.64□□□□□ -1.99
Cacna1bO55017 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Cacna1bO55017 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cacna1bO55017 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cacna1bO55017 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cacna1bO55017 Gm11253-201ENSMUST00000118486 201 ntBASIC2.64□□□□□ -1.99
Cacna1bO55017 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.64□□□□□ -1.99
Cacna1bO55017 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms