Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm12045-201ENSMUST00000122122 573 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm24910-201ENSMUST00000157289 272 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm23905-201ENSMUST00000157568 109 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm26187-201ENSMUST00000157693 101 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm24014-201ENSMUST00000157728 157 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm25456-201ENSMUST00000157952 109 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm23379-201ENSMUST00000180026 107 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm5372-201ENSMUST00000187540 409 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm38088-201ENSMUST00000195829 241 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm42465-201ENSMUST00000197036 492 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm3189-201ENSMUST00000205595 832 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm4501-201ENSMUST00000207330 551 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm4558-201ENSMUST00000207886 521 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm4528-201ENSMUST00000207905 551 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm19032-201ENSMUST00000208584 592 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm23447-201ENSMUST00000082798 163 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.05□□□□□ -1.76
Pcdh9F8VPK8 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm15151-201ENSMUST00000117106 177 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm15176-201ENSMUST00000117734 135 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm14731-201ENSMUST00000119216 376 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm5942-201ENSMUST00000120046 439 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm8244-201ENSMUST00000121254 264 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm15038-201ENSMUST00000122144 296 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm23591-201ENSMUST00000157663 286 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Mir5134-201ENSMUST00000175529 78 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Mir6963-201ENSMUST00000183535 71 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm27828-201ENSMUST00000184108 119 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm27236-201ENSMUST00000184147 442 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm17929-201ENSMUST00000186851 627 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm4248-201ENSMUST00000196905 316 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm42451-201ENSMUST00000197410 244 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm5983-201ENSMUST00000197739 770 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm45192-201ENSMUST00000206749 283 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm45690-201ENSMUST00000210775 246 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm45742-201ENSMUST00000212400 433 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm18228-201ENSMUST00000217297 1091 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 AC156560.1-201ENSMUST00000221425 256 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 AC116589.4-201ENSMUST00000222390 216 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Mir34b-201ENSMUST00000083558 84 ntBASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh9F8VPK8 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 AC167192.3-201ENSMUST00000224096 1567 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm4736-201ENSMUST00000100870 380 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm11488-201ENSMUST00000117277 863 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm13268-201ENSMUST00000117485 433 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm22345-201ENSMUST00000122644 107 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm2862-201ENSMUST00000161524 328 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm17153-201ENSMUST00000171314 490 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm19203-201ENSMUST00000174049 939 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm18396-201ENSMUST00000177095 361 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms