Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Gm38375-201ENSMUST00000194610 2227 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Gm43521-201ENSMUST00000197838 255 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Amd-ps5-201ENSMUST00000198406 989 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Gm43107-201ENSMUST00000198729 255 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Gm18611-201ENSMUST00000200334 1118 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Gm43881-201ENSMUST00000203051 2530 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Gm18597-201ENSMUST00000209519 694 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 AC132384.5-201ENSMUST00000218562 226 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Gm18116-201ENSMUST00000220920 537 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Gm46369-201ENSMUST00000221577 401 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav8-1A0A075B641 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Mir294-201ENSMUST00000104710 84 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm14987-201ENSMUST00000117820 676 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm14469-201ENSMUST00000118363 202 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm26254-201ENSMUST00000122491 118 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm23599-201ENSMUST00000157261 251 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm24475-201ENSMUST00000157435 143 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm16026-202ENSMUST00000159695 772 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm17065-201ENSMUST00000165245 239 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Mir6353-201ENSMUST00000183596 113 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm37007-201ENSMUST00000194234 319 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm42593-201ENSMUST00000198469 377 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm45522-201ENSMUST00000210784 166 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm19563-201ENSMUST00000222031 270 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav8-1A0A075B641 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm25833-201ENSMUST00000104137 133 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm14579-201ENSMUST00000117068 283 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm11406-201ENSMUST00000117418 484 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm14537-201ENSMUST00000117464 599 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm13349-201ENSMUST00000118436 411 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm26100-201ENSMUST00000157245 127 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm26362-201ENSMUST00000158865 315 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm17030-201ENSMUST00000167016 393 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm20526-201ENSMUST00000173416 158 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm21893-201ENSMUST00000179119 397 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Mir6385-201ENSMUST00000184295 105 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm17966-201ENSMUST00000193453 594 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm43746-201ENSMUST00000200028 317 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm45080-201ENSMUST00000206648 283 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm44903-201ENSMUST00000206840 130 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm45245-201ENSMUST00000210082 376 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm45574-201ENSMUST00000210921 331 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm7639-201ENSMUST00000212608 484 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm18015-201ENSMUST00000214879 316 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm5176-202ENSMUST00000220267 583 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 AC156790.5-201ENSMUST00000227075 231 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms