Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb2S4R1M3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb2S4R1M3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
H2afb2S4R1M3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb2S4R1M3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb2S4R1M3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
H2afb2S4R1M3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.33■□□□□ 0.36
H2afb2S4R1M3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb2S4R1M3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb2S4R1M3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb2S4R1M3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb2S4R1M3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb2S4R1M3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb2S4R1M3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Gm10698-201ENSMUST00000182663 604 ntBASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Gm10517-202ENSMUST00000192970 758 ntBASIC17.32■□□□□ 0.36
H2afb2S4R1M3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb2S4R1M3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb2S4R1M3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb2S4R1M3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.29■□□□□ 0.36
H2afb2S4R1M3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb2S4R1M3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Gm13168-201ENSMUST00000121771 632 ntBASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb2S4R1M3 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.27■□□□□ 0.36
H2afb2S4R1M3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms