Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Gm29257-201ENSMUST00000186115 639 ntBASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn9Q9Z0S7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Gm5643-201ENSMUST00000117081 966 ntBASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cldn9Q9Z0S7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Gm4974-201ENSMUST00000209974 875 ntBASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn9Q9Z0S7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Gm43183-201ENSMUST00000200632 547 ntBASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms