Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Smarcb1Q9Z0H3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Gm9013-201ENSMUST00000132939 882 ntBASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Gm18958-201ENSMUST00000174258 762 ntBASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Gm6345-202ENSMUST00000180900 204 ntBASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Smarcb1Q9Z0H3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcb1Q9Z0H3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcb1Q9Z0H3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Gm5587-201ENSMUST00000206270 674 ntBASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.91■□□□□ 0.46
Smarcb1Q9Z0H3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Gm26039-201ENSMUST00000158152 144 ntBASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms