Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn3Q9Z0G9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn3Q9Z0G9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn3Q9Z0G9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn3Q9Z0G9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn3Q9Z0G9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn3Q9Z0G9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn3Q9Z0G9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn3Q9Z0G9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn3Q9Z0G9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn3Q9Z0G9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn3Q9Z0G9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn3Q9Z0G9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.5■□□□□ 0.39
Cldn3Q9Z0G9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn3Q9Z0G9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cldn3Q9Z0G9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn3Q9Z0G9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn3Q9Z0G9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn3Q9Z0G9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn3Q9Z0G9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms