Protein–RNA interactions for Protein: Q9WU78

Pdcd6ip, Programmed cell death 6-interacting protein, mousemouse

Known RBP Predictions only

Length 869 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdcd6ipQ9WU78 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pdcd6ipQ9WU78 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdcd6ipQ9WU78 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdcd6ipQ9WU78 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdcd6ipQ9WU78 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pdcd6ipQ9WU78 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdcd6ipQ9WU78 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pdcd6ipQ9WU78 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pdcd6ipQ9WU78 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.1■□□□□ 0.81
Pdcd6ipQ9WU78 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdcd6ipQ9WU78 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdcd6ipQ9WU78 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdcd6ipQ9WU78 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pdcd6ipQ9WU78 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdcd6ipQ9WU78 Gm13474-201ENSMUST00000122466 815 ntBASIC20.08■□□□□ 0.81
Pdcd6ipQ9WU78 Gm33142-201ENSMUST00000193913 867 ntBASIC20.08■□□□□ 0.81
Pdcd6ipQ9WU78 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Pdcd6ipQ9WU78 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Pdcd6ipQ9WU78 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdcd6ipQ9WU78 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdcd6ipQ9WU78 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdcd6ipQ9WU78 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdcd6ipQ9WU78 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdcd6ipQ9WU78 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdcd6ipQ9WU78 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pdcd6ipQ9WU78 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdcd6ipQ9WU78 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdcd6ipQ9WU78 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdcd6ipQ9WU78 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdcd6ipQ9WU78 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdcd6ipQ9WU78 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Pdcd6ipQ9WU78 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdcd6ipQ9WU78 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Pdcd6ipQ9WU78 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdcd6ipQ9WU78 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.06■□□□□ 0.8
Pdcd6ipQ9WU78 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pdcd6ipQ9WU78 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdcd6ipQ9WU78 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdcd6ipQ9WU78 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pdcd6ipQ9WU78 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.06■□□□□ 0.8
Pdcd6ipQ9WU78 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdcd6ipQ9WU78 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdcd6ipQ9WU78 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdcd6ipQ9WU78 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdcd6ipQ9WU78 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.05■□□□□ 0.8
Pdcd6ipQ9WU78 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdcd6ipQ9WU78 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdcd6ipQ9WU78 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdcd6ipQ9WU78 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdcd6ipQ9WU78 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pdcd6ipQ9WU78 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms