Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Gm6345-202ENSMUST00000180900 204 ntBASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn8aQ9WTU3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Gm7213-201ENSMUST00000215977 950 ntBASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn8aQ9WTU3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Rarb-207ENSMUST00000225921 2756 ntBASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn8aQ9WTU3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn8aQ9WTU3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn8aQ9WTU3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Scn8aQ9WTU3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn8aQ9WTU3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn8aQ9WTU3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn8aQ9WTU3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn8aQ9WTU3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scn8aQ9WTU3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn8aQ9WTU3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Scn8aQ9WTU3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn8aQ9WTU3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn8aQ9WTU3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms