Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Sec61a2Q9JLR1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.58■□□□□ 0.08
Sec61a2Q9JLR1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Gm29791-202ENSMUST00000207888 369 ntBASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sec61a2Q9JLR1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Gm22240-201ENSMUST00000175225 82 ntBASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a2Q9JLR1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Gm10418-201ENSMUST00000100943 576 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms