Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx5Q9JL61 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx5Q9JL61 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx5Q9JL61 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.29■□□□□ 0.52
Rfx5Q9JL61 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx5Q9JL61 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx5Q9JL61 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx5Q9JL61 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx5Q9JL61 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx5Q9JL61 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx5Q9JL61 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx5Q9JL61 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx5Q9JL61 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Gm7889-201ENSMUST00000185591 958 ntBASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx5Q9JL61 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx5Q9JL61 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Rfx5Q9JL61 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfx5Q9JL61 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfx5Q9JL61 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx5Q9JL61 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx5Q9JL61 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx5Q9JL61 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx5Q9JL61 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx5Q9JL61 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx5Q9JL61 Gm6433-201ENSMUST00000118634 875 ntBASIC18.26■□□□□ 0.51
Rfx5Q9JL61 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rfx5Q9JL61 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rfx5Q9JL61 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rfx5Q9JL61 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx5Q9JL61 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx5Q9JL61 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx5Q9JL61 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Mir7071-201ENSMUST00000184847 69 ntBASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Gm9987-201ENSMUST00000069768 567 ntBASIC18.24■□□□□ 0.51
Rfx5Q9JL61 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms