Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3aQ9JKX8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3aQ9JKX8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3aQ9JKX8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3aQ9JKX8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Upk3aQ9JKX8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3aQ9JKX8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Gm7791-201ENSMUST00000219066 539 ntBASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3aQ9JKX8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3aQ9JKX8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.64■□□□□ 0.26
Upk3aQ9JKX8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Upk3aQ9JKX8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3aQ9JKX8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Gm30025-201ENSMUST00000218555 728 ntBASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3aQ9JKX8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Upk3aQ9JKX8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.62■□□□□ 0.25
Upk3aQ9JKX8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.62■□□□□ 0.25
Upk3aQ9JKX8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Upk3aQ9JKX8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.62■□□□□ 0.25
Upk3aQ9JKX8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Upk3aQ9JKX8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms