Protein–RNA interactions for Protein: Q9JJ89

Ccdc86, Coiled-coil domain-containing protein 86, mousemouse

Predictions only

Length 426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc86Q9JJ89 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc86Q9JJ89 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc86Q9JJ89 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.66■□□□□ 0.42
Ccdc86Q9JJ89 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.66■□□□□ 0.42
Ccdc86Q9JJ89 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.66■□□□□ 0.42
Ccdc86Q9JJ89 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc86Q9JJ89 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc86Q9JJ89 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc86Q9JJ89 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc86Q9JJ89 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc86Q9JJ89 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc86Q9JJ89 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc86Q9JJ89 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc86Q9JJ89 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc86Q9JJ89 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.65■□□□□ 0.42
Ccdc86Q9JJ89 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc86Q9JJ89 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.65■□□□□ 0.42
Ccdc86Q9JJ89 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc86Q9JJ89 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc86Q9JJ89 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc86Q9JJ89 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc86Q9JJ89 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc86Q9JJ89 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Ccdc86Q9JJ89 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Ccdc86Q9JJ89 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc86Q9JJ89 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Gm38027-201ENSMUST00000192315 235 ntBASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc86Q9JJ89 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Mir5122-201ENSMUST00000175004 89 ntBASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc86Q9JJ89 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc86Q9JJ89 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc86Q9JJ89 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc86Q9JJ89 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc86Q9JJ89 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc86Q9JJ89 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.61■□□□□ 0.41
Ccdc86Q9JJ89 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc86Q9JJ89 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc86Q9JJ89 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.61■□□□□ 0.41
Ccdc86Q9JJ89 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc86Q9JJ89 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.61■□□□□ 0.41
Ccdc86Q9JJ89 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc86Q9JJ89 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc86Q9JJ89 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms