Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rbfox1Q9JJ43 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Gm13401-201ENSMUST00000117074 291 ntBASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rbfox1Q9JJ43 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Gm27405-201ENSMUST00000184201 112 ntBASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rbfox1Q9JJ43 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Gm2559-201ENSMUST00000201323 363 ntBASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.72□□□□□ -0.05
Rbfox1Q9JJ43 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms