Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf13bQ9ET35 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf13bQ9ET35 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Gm7291-201ENSMUST00000199147 382 ntBASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf13bQ9ET35 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Dancr-204ENSMUST00000132389 2347 ntBASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf13bQ9ET35 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf13bQ9ET35 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf13bQ9ET35 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf13bQ9ET35 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf13bQ9ET35 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf13bQ9ET35 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf13bQ9ET35 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf13bQ9ET35 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms