Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ube4bQ9ES00 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4bQ9ES00 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Gm40848-201ENSMUST00000221998 324 ntBASIC16.65■□□□□ 0.26
Ube4bQ9ES00 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ube4bQ9ES00 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ube4bQ9ES00 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4bQ9ES00 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4bQ9ES00 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms