Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.74■□□□□ 0.43
Nkx2-4Q9EQM3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Gm12644-201ENSMUST00000119935 606 ntBASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Rps4l-201ENSMUST00000071745 943 ntBASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Nkx2-4Q9EQM3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Gm1401-201ENSMUST00000122048 772 ntBASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-4Q9EQM3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.71■□□□□ 0.43
Nkx2-4Q9EQM3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nkx2-4Q9EQM3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nkx2-4Q9EQM3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Gm11336-201ENSMUST00000118168 334 ntBASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Gm2213-201ENSMUST00000197485 688 ntBASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nkx2-4Q9EQM3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-4Q9EQM3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms