Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Col4a3bpQ9EQG9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a3bpQ9EQG9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a3bpQ9EQG9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.83■□□□□ 0.77
Col4a3bpQ9EQG9 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.83■□□□□ 0.77
Col4a3bpQ9EQG9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.83■□□□□ 0.77
Col4a3bpQ9EQG9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.83■□□□□ 0.77
Col4a3bpQ9EQG9 Gm10252-201ENSMUST00000209541 832 ntBASIC19.83■□□□□ 0.77
Col4a3bpQ9EQG9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a3bpQ9EQG9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Col4a3bpQ9EQG9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a3bpQ9EQG9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a3bpQ9EQG9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a3bpQ9EQG9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a3bpQ9EQG9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a3bpQ9EQG9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a3bpQ9EQG9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Gm15375-201ENSMUST00000119510 849 ntBASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a3bpQ9EQG9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Gm15378-201ENSMUST00000121894 207 ntBASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a3bpQ9EQG9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a3bpQ9EQG9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Col4a3bpQ9EQG9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms