Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Gm13036-201ENSMUST00000117799 748 ntBASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Gm4535-201ENSMUST00000182274 558 ntBASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Gm8396-201ENSMUST00000057361 823 ntBASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Gm10355-201ENSMUST00000097146 517 ntBASIC19.72■□□□□ 0.75
Upf1Q9EPU0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Upf1Q9EPU0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Mir8117-201ENSMUST00000184773 107 ntBASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Gm6550-201ENSMUST00000187574 993 ntBASIC19.7■□□□□ 0.74
Upf1Q9EPU0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.7■□□□□ 0.74
Upf1Q9EPU0 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upf1Q9EPU0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upf1Q9EPU0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.69■□□□□ 0.74
Upf1Q9EPU0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Upf1Q9EPU0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Upf1Q9EPU0 AA543401-201ENSMUST00000164248 1269 ntBASIC19.69■□□□□ 0.74
Upf1Q9EPU0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Upf1Q9EPU0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.69■□□□□ 0.74
Upf1Q9EPU0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.69■□□□□ 0.74
Upf1Q9EPU0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upf1Q9EPU0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upf1Q9EPU0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Upf1Q9EPU0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Upf1Q9EPU0 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.68■□□□□ 0.74
Upf1Q9EPU0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Upf1Q9EPU0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.68■□□□□ 0.74
Upf1Q9EPU0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upf1Q9EPU0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.68■□□□□ 0.74
Upf1Q9EPU0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upf1Q9EPU0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upf1Q9EPU0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Upf1Q9EPU0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.68■□□□□ 0.74
Upf1Q9EPU0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Upf1Q9EPU0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Upf1Q9EPU0 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.68■□□□□ 0.74
Upf1Q9EPU0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upf1Q9EPU0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upf1Q9EPU0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upf1Q9EPU0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.67■□□□□ 0.74
Upf1Q9EPU0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.67■□□□□ 0.74
Upf1Q9EPU0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.67■□□□□ 0.74
Upf1Q9EPU0 Gm20949-201ENSMUST00000206478 952 ntBASIC19.67■□□□□ 0.74
Upf1Q9EPU0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Upf1Q9EPU0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Upf1Q9EPU0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Upf1Q9EPU0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upf1Q9EPU0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms