Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp8Q9DB85 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp8Q9DB85 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Gm10566-201ENSMUST00000086739 996 ntBASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp8Q9DB85 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Gm18958-201ENSMUST00000174258 762 ntBASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Mir3081-201ENSMUST00000175305 84 ntBASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.92■□□□□ 0.3
Rrp8Q9DB85 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp8Q9DB85 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms