Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smco2Q9DA21 Gm27463-201ENSMUST00000183569 57 ntBASIC19.5■□□□□ 0.71
Smco2Q9DA21 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.5■□□□□ 0.71
Smco2Q9DA21 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.5■□□□□ 0.71
Smco2Q9DA21 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smco2Q9DA21 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smco2Q9DA21 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smco2Q9DA21 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smco2Q9DA21 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smco2Q9DA21 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smco2Q9DA21 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smco2Q9DA21 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smco2Q9DA21 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.49■□□□□ 0.71
Smco2Q9DA21 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smco2Q9DA21 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.49■□□□□ 0.71
Smco2Q9DA21 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smco2Q9DA21 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smco2Q9DA21 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.49■□□□□ 0.71
Smco2Q9DA21 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smco2Q9DA21 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smco2Q9DA21 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smco2Q9DA21 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smco2Q9DA21 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.48■□□□□ 0.71
Smco2Q9DA21 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Smco2Q9DA21 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco2Q9DA21 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Smco2Q9DA21 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.47■□□□□ 0.71
Smco2Q9DA21 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smco2Q9DA21 Gm13401-201ENSMUST00000117074 291 ntBASIC19.47■□□□□ 0.71
Smco2Q9DA21 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.47■□□□□ 0.71
Smco2Q9DA21 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.47■□□□□ 0.71
Smco2Q9DA21 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Smco2Q9DA21 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.47■□□□□ 0.71
Smco2Q9DA21 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smco2Q9DA21 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Smco2Q9DA21 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Smco2Q9DA21 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smco2Q9DA21 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.47■□□□□ 0.71
Smco2Q9DA21 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smco2Q9DA21 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smco2Q9DA21 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smco2Q9DA21 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smco2Q9DA21 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.46■□□□□ 0.71
Smco2Q9DA21 Gm29791-202ENSMUST00000207888 369 ntBASIC19.46■□□□□ 0.71
Smco2Q9DA21 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.46■□□□□ 0.71
Smco2Q9DA21 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco2Q9DA21 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms