Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp4cQ9D7F7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4cQ9D7F7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4cQ9D7F7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4cQ9D7F7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4cQ9D7F7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4cQ9D7F7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Chmp4cQ9D7F7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp4cQ9D7F7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp4cQ9D7F7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp4cQ9D7F7 Gm2559-201ENSMUST00000201323 363 ntBASIC20.69■□□□□ 0.9
Chmp4cQ9D7F7 Gm29791-202ENSMUST00000207888 369 ntBASIC20.69■□□□□ 0.9
Chmp4cQ9D7F7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Chmp4cQ9D7F7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp4cQ9D7F7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Gm13401-201ENSMUST00000117074 291 ntBASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Mir2861-201ENSMUST00000175539 82 ntBASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Gm27275-201ENSMUST00000184318 272 ntBASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Gm4968-201ENSMUST00000071458 858 ntBASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4cQ9D7F7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4cQ9D7F7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4cQ9D7F7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4cQ9D7F7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms