Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Gm18958-201ENSMUST00000174258 762 ntBASIC19.07■□□□□ 0.64
Rpap3Q9D706 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap3Q9D706 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.07■□□□□ 0.64
Rpap3Q9D706 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Gm25016-201ENSMUST00000158399 131 ntBASIC19.06■□□□□ 0.64
Rpap3Q9D706 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpap3Q9D706 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.05■□□□□ 0.64
Rpap3Q9D706 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Gm21362-201ENSMUST00000194272 928 ntBASIC19.04■□□□□ 0.64
Rpap3Q9D706 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpap3Q9D706 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.04■□□□□ 0.64
Rpap3Q9D706 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Rpap3Q9D706 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.03■□□□□ 0.64
Rpap3Q9D706 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpap3Q9D706 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.03■□□□□ 0.64
Rpap3Q9D706 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap3Q9D706 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap3Q9D706 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rpap3Q9D706 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap3Q9D706 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Rpap3Q9D706 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap3Q9D706 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.02■□□□□ 0.64
Rpap3Q9D706 Gm33142-201ENSMUST00000193913 867 ntBASIC19.02■□□□□ 0.64
Rpap3Q9D706 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.02■□□□□ 0.64
Rpap3Q9D706 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap3Q9D706 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap3Q9D706 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpap3Q9D706 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rpap3Q9D706 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms