Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Stag1Q9D3E6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Stag1Q9D3E6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Stag1Q9D3E6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stag1Q9D3E6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stag1Q9D3E6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stag1Q9D3E6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Stag1Q9D3E6 Gm7284-201ENSMUST00000131667 944 ntBASIC20.6■□□□□ 0.89
Stag1Q9D3E6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Stag1Q9D3E6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stag1Q9D3E6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Stag1Q9D3E6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Stag1Q9D3E6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Stag1Q9D3E6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Stag1Q9D3E6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Gm11355-201ENSMUST00000121120 306 ntBASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.58■□□□□ 0.89
Stag1Q9D3E6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Gm10566-201ENSMUST00000086739 996 ntBASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Stag1Q9D3E6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Stag1Q9D3E6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Stag1Q9D3E6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.58■□□□□ 0.88
Stag1Q9D3E6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Stag1Q9D3E6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Stag1Q9D3E6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Stag1Q9D3E6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Stag1Q9D3E6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Gm26039-201ENSMUST00000158152 144 ntBASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Gm29518-201ENSMUST00000190858 372 ntBASIC20.57■□□□□ 0.88
Stag1Q9D3E6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stag1Q9D3E6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Gm9103-201ENSMUST00000119371 405 ntBASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Gm27704-201ENSMUST00000185094 107 ntBASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stag1Q9D3E6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms