Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rufy3Q9D394 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rufy3Q9D394 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rufy3Q9D394 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rufy3Q9D394 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rufy3Q9D394 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rufy3Q9D394 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rufy3Q9D394 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.3■□□□□ 0.84
Rufy3Q9D394 Gm18666-201ENSMUST00000190039 958 ntBASIC20.3■□□□□ 0.84
Rufy3Q9D394 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.3■□□□□ 0.84
Rufy3Q9D394 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.3■□□□□ 0.84
Rufy3Q9D394 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Rufy3Q9D394 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rufy3Q9D394 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rufy3Q9D394 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Rufy3Q9D394 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rufy3Q9D394 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.28■□□□□ 0.84
Rufy3Q9D394 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.28■□□□□ 0.84
Rufy3Q9D394 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rufy3Q9D394 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rufy3Q9D394 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.28■□□□□ 0.84
Rufy3Q9D394 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Rufy3Q9D394 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rufy3Q9D394 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.28■□□□□ 0.84
Rufy3Q9D394 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.28■□□□□ 0.84
Rufy3Q9D394 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rufy3Q9D394 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rufy3Q9D394 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rufy3Q9D394 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rufy3Q9D394 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.27■□□□□ 0.84
Rufy3Q9D394 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rufy3Q9D394 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rufy3Q9D394 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rufy3Q9D394 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rufy3Q9D394 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.27■□□□□ 0.84
Rufy3Q9D394 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rufy3Q9D394 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rufy3Q9D394 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rufy3Q9D394 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rufy3Q9D394 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rufy3Q9D394 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rufy3Q9D394 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rufy3Q9D394 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rufy3Q9D394 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rufy3Q9D394 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.26■□□□□ 0.83
Rufy3Q9D394 Gm43183-201ENSMUST00000200632 547 ntBASIC20.26■□□□□ 0.83
Rufy3Q9D394 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.26■□□□□ 0.83
Rufy3Q9D394 Gm4974-201ENSMUST00000209974 875 ntBASIC20.26■□□□□ 0.83
Rufy3Q9D394 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rufy3Q9D394 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.26■□□□□ 0.83
Rufy3Q9D394 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rufy3Q9D394 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rufy3Q9D394 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rufy3Q9D394 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rufy3Q9D394 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rufy3Q9D394 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rufy3Q9D394 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rufy3Q9D394 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rufy3Q9D394 Gm5643-201ENSMUST00000117081 966 ntBASIC20.25■□□□□ 0.83
Rufy3Q9D394 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Rufy3Q9D394 Gm10517-202ENSMUST00000192970 758 ntBASIC20.25■□□□□ 0.83
Rufy3Q9D394 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rufy3Q9D394 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rufy3Q9D394 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rufy3Q9D394 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.25■□□□□ 0.83
Rufy3Q9D394 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rufy3Q9D394 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Rufy3Q9D394 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rufy3Q9D394 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rufy3Q9D394 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rufy3Q9D394 Gm12382-201ENSMUST00000122005 922 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms