Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.61■□□□□ 0.41
Ndc80Q9D0F1 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Gm5643-201ENSMUST00000117081 966 ntBASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Gm11643-201ENSMUST00000119578 864 ntBASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc80Q9D0F1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Gm18025-201ENSMUST00000221733 862 ntBASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc80Q9D0F1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ndc80Q9D0F1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ndc80Q9D0F1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ndc80Q9D0F1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ndc80Q9D0F1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ndc80Q9D0F1 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.58■□□□□ 0.41
Ndc80Q9D0F1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ndc80Q9D0F1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ndc80Q9D0F1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc80Q9D0F1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Ndc80Q9D0F1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc80Q9D0F1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.58■□□□□ 0.4
Ndc80Q9D0F1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc80Q9D0F1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.58■□□□□ 0.4
Ndc80Q9D0F1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc80Q9D0F1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc80Q9D0F1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc80Q9D0F1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc80Q9D0F1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc80Q9D0F1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc80Q9D0F1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms