Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.42□□□□□ -0.1
Ssbp3Q9D032 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp3Q9D032 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp3Q9D032 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp3Q9D032 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp3Q9D032 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp3Q9D032 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp3Q9D032 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp3Q9D032 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ssbp3Q9D032 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp3Q9D032 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp3Q9D032 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Gm43799-201ENSMUST00000201845 579 ntBASIC14.4□□□□□ -0.1
Ssbp3Q9D032 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp3Q9D032 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Gm27463-201ENSMUST00000183569 57 ntBASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Gm38027-201ENSMUST00000192315 235 ntBASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp3Q9D032 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssbp3Q9D032 Gm6433-201ENSMUST00000118634 875 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms