Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.3□□□□□ -0.92
Sec61bQ9CQS8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61bQ9CQS8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61bQ9CQS8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61bQ9CQS8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61bQ9CQS8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC9.3□□□□□ -0.92
Sec61bQ9CQS8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Sec61bQ9CQS8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Gm24841-201ENSMUST00000158676 357 ntBASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61bQ9CQS8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Gm7638-201ENSMUST00000121348 967 ntBASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Gm22119-201ENSMUST00000175594 99 ntBASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Gm42941-201ENSMUST00000200347 1321 ntBASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61bQ9CQS8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Sec61bQ9CQS8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sec61bQ9CQS8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Sec61bQ9CQS8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sec61bQ9CQS8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sec61bQ9CQS8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Gm9731-201ENSMUST00000209480 747 ntBASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 BC021767-201ENSMUST00000126387 1716 ntBASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms