Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Prpf8Q99PV0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Gm9731-201ENSMUST00000209480 747 ntBASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Gm18958-201ENSMUST00000174258 762 ntBASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Gm5867-201ENSMUST00000063197 592 ntBASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Prpf8Q99PV0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf8Q99PV0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Gm21559-201ENSMUST00000220638 855 ntBASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Gm8587-201ENSMUST00000076538 843 ntBASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Gm27704-201ENSMUST00000185094 107 ntBASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Gm17807-201ENSMUST00000186869 298 ntBASIC14.12□□□□□ -0.15
Prpf8Q99PV0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf8Q99PV0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf8Q99PV0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Gm25925-201ENSMUST00000158314 306 ntBASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Il3ra-202ENSMUST00000223589 738 ntBASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf8Q99PV0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms