Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.37■■□□□ 1.01
Trim34aQ99PP6 Gm18669-201ENSMUST00000216049 778 ntBASIC21.37■■□□□ 1.01
Trim34aQ99PP6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim34aQ99PP6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim34aQ99PP6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim34aQ99PP6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim34aQ99PP6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim34aQ99PP6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim34aQ99PP6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Gm37722-201ENSMUST00000193757 208 ntBASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim34aQ99PP6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim34aQ99PP6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim34aQ99PP6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim34aQ99PP6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim34aQ99PP6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.34■■□□□ 1.01
Trim34aQ99PP6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim34aQ99PP6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Trim34aQ99PP6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim34aQ99PP6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim34aQ99PP6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim34aQ99PP6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trim34aQ99PP6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim34aQ99PP6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34aQ99PP6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34aQ99PP6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.33■■□□□ 1.01
Trim34aQ99PP6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34aQ99PP6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34aQ99PP6 Mir770-201ENSMUST00000103252 94 ntBASIC21.33■■□□□ 1.01
Trim34aQ99PP6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34aQ99PP6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Trim34aQ99PP6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34aQ99PP6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34aQ99PP6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34aQ99PP6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Trim34aQ99PP6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim34aQ99PP6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Trim34aQ99PP6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim34aQ99PP6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim34aQ99PP6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34aQ99PP6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim34aQ99PP6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34aQ99PP6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim34aQ99PP6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.32■■□□□ 1
Trim34aQ99PP6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34aQ99PP6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.32■■□□□ 1
Trim34aQ99PP6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34aQ99PP6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34aQ99PP6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim34aQ99PP6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Trim34aQ99PP6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim34aQ99PP6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.31■■□□□ 1
Trim34aQ99PP6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim34aQ99PP6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Trim34aQ99PP6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim34aQ99PP6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.31■■□□□ 1
Trim34aQ99PP6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.31■■□□□ 1
Trim34aQ99PP6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim34aQ99PP6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Trim34aQ99PP6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.31■■□□□ 1
Trim34aQ99PP6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.31■■□□□ 1
Trim34aQ99PP6 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.31■■□□□ 1
Trim34aQ99PP6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim34aQ99PP6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim34aQ99PP6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim34aQ99PP6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.31■■□□□ 1
Trim34aQ99PP6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim34aQ99PP6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim34aQ99PP6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim34aQ99PP6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Trim34aQ99PP6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim34aQ99PP6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34aQ99PP6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms