Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim8Q99PJ2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Gm29791-202ENSMUST00000207888 369 ntBASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim8Q99PJ2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim8Q99PJ2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trim8Q99PJ2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trim8Q99PJ2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim8Q99PJ2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Gm38285-201ENSMUST00000192928 922 ntBASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.95■□□□□ 0.3
Trim8Q99PJ2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim8Q99PJ2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim8Q99PJ2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim8Q99PJ2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim8Q99PJ2 Gm2399-201ENSMUST00000104944 225 ntBASIC16.93■□□□□ 0.3
Trim8Q99PJ2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim8Q99PJ2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim8Q99PJ2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim8Q99PJ2 Mir8112-201ENSMUST00000184382 131 ntBASIC16.93■□□□□ 0.3
Trim8Q99PJ2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms