Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Gm6433-201ENSMUST00000118634 875 ntBASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gtf2ird2Q99NI3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Gm11539-201ENSMUST00000119837 557 ntBASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Gm13436-201ENSMUST00000120418 567 ntBASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Gtf2ird2Q99NI3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 Gm13559-201ENSMUST00000120476 863 ntBASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 Gm13836-201ENSMUST00000121159 501 ntBASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gtf2ird2Q99NI3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gtf2ird2Q99NI3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Gtf2ird2Q99NI3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Gtf2ird2Q99NI3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gtf2ird2Q99NI3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gtf2ird2Q99NI3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gtf2ird2Q99NI3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms