Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh4Q99MT2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.85■□□□□ 0.29
Msh4Q99MT2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Mir6349-201ENSMUST00000184059 97 ntBASIC16.85■□□□□ 0.29
Msh4Q99MT2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Gm18025-201ENSMUST00000221733 862 ntBASIC16.85■□□□□ 0.29
Msh4Q99MT2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Msh4Q99MT2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Msh4Q99MT2 Idnk-204ENSMUST00000226010 1898 ntBASIC16.84■□□□□ 0.29
Msh4Q99MT2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Msh4Q99MT2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh4Q99MT2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.83■□□□□ 0.28
Msh4Q99MT2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Msh4Q99MT2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.83■□□□□ 0.28
Msh4Q99MT2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.83■□□□□ 0.28
Msh4Q99MT2 Gm42545-201ENSMUST00000202755 922 ntBASIC16.83■□□□□ 0.28
Msh4Q99MT2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh4Q99MT2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh4Q99MT2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh4Q99MT2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh4Q99MT2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh4Q99MT2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh4Q99MT2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Mir1199-201ENSMUST00000117015 119 ntBASIC16.82■□□□□ 0.28
Msh4Q99MT2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.82■□□□□ 0.28
Msh4Q99MT2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.82■□□□□ 0.28
Msh4Q99MT2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Msh4Q99MT2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms