Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf111Q99ML9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf111Q99ML9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rnf111Q99ML9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf111Q99ML9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.81■□□□□ 0.28
Rnf111Q99ML9 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.81■□□□□ 0.28
Rnf111Q99ML9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Gm38285-201ENSMUST00000192928 922 ntBASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Zfp783-201ENSMUST00000095946 670 ntBASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf111Q99ML9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf111Q99ML9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf111Q99ML9 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.79■□□□□ 0.28
Rnf111Q99ML9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf111Q99ML9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf111Q99ML9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf111Q99ML9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf111Q99ML9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf111Q99ML9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf111Q99ML9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf111Q99ML9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf111Q99ML9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Gm11927-201ENSMUST00000118472 759 ntBASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf111Q99ML9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.77■□□□□ 0.27
Rnf111Q99ML9 Dio3-201ENSMUST00000097228 1449 ntBASIC16.77■□□□□ 0.27
Rnf111Q99ML9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf111Q99ML9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf111Q99ML9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf111Q99ML9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf111Q99ML9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf111Q99ML9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf111Q99ML9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Dancr-204ENSMUST00000132389 2347 ntBASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf111Q99ML9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rnf111Q99ML9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf111Q99ML9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf111Q99ML9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf111Q99ML9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf111Q99ML9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.75■□□□□ 0.27
Rnf111Q99ML9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf111Q99ML9 Gm20049-201ENSMUST00000219950 730 ntBASIC16.75■□□□□ 0.27
Rnf111Q99ML9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms