Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr3Q99MB1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tlr3Q99MB1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Tlr3Q99MB1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Tlr3Q99MB1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tlr3Q99MB1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Tlr3Q99MB1 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.58■□□□□ 0.57
Tlr3Q99MB1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tlr3Q99MB1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tlr3Q99MB1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tlr3Q99MB1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tlr3Q99MB1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tlr3Q99MB1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tlr3Q99MB1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tlr3Q99MB1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.58■□□□□ 0.56
Tlr3Q99MB1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tlr3Q99MB1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tlr3Q99MB1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tlr3Q99MB1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tlr3Q99MB1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.56■□□□□ 0.56
Tlr3Q99MB1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tlr3Q99MB1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tlr3Q99MB1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.56■□□□□ 0.56
Tlr3Q99MB1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Tlr3Q99MB1 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.56■□□□□ 0.56
Tlr3Q99MB1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tlr3Q99MB1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tlr3Q99MB1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tlr3Q99MB1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tlr3Q99MB1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tlr3Q99MB1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tlr3Q99MB1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tlr3Q99MB1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms