Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nck1Q99M51 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nck1Q99M51 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nck1Q99M51 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nck1Q99M51 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nck1Q99M51 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nck1Q99M51 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.53■□□□□ 0.24
Nck1Q99M51 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Nck1Q99M51 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Nck1Q99M51 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.53■□□□□ 0.24
Nck1Q99M51 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Nck1Q99M51 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nck1Q99M51 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nck1Q99M51 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nck1Q99M51 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Nck1Q99M51 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.52■□□□□ 0.24
Nck1Q99M51 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.52■□□□□ 0.24
Nck1Q99M51 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.52■□□□□ 0.24
Nck1Q99M51 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nck1Q99M51 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Nck1Q99M51 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nck1Q99M51 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nck1Q99M51 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nck1Q99M51 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nck1Q99M51 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nck1Q99M51 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nck1Q99M51 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nck1Q99M51 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nck1Q99M51 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.51■□□□□ 0.23
Nck1Q99M51 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nck1Q99M51 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.51■□□□□ 0.23
Nck1Q99M51 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.5■□□□□ 0.23
Nck1Q99M51 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.5■□□□□ 0.23
Nck1Q99M51 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.5■□□□□ 0.23
Nck1Q99M51 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nck1Q99M51 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Nck1Q99M51 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.5■□□□□ 0.23
Nck1Q99M51 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nck1Q99M51 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nck1Q99M51 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nck1Q99M51 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nck1Q99M51 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nck1Q99M51 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nck1Q99M51 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nck1Q99M51 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nck1Q99M51 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nck1Q99M51 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.49■□□□□ 0.23
Nck1Q99M51 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nck1Q99M51 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms