Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhac1Q91Y10 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhac1Q91Y10 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.21■□□□□ 0.18
Pcdhac1Q91Y10 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhac1Q91Y10 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhac1Q91Y10 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Gm2559-201ENSMUST00000201323 363 ntBASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhac1Q91Y10 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Pcdhac1Q91Y10 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Flg-201ENSMUST00000050758 1488 ntBASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Gm38285-201ENSMUST00000192928 922 ntBASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhac1Q91Y10 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms