Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb22Q91XZ8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.21■□□□□ 0.83
Pcdhb22Q91XZ8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb22Q91XZ8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb22Q91XZ8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb22Q91XZ8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdhb22Q91XZ8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb22Q91XZ8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb22Q91XZ8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb22Q91XZ8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb22Q91XZ8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb22Q91XZ8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb22Q91XZ8 Il3ra-202ENSMUST00000223589 738 ntBASIC20.2■□□□□ 0.82
Pcdhb22Q91XZ8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdhb22Q91XZ8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb22Q91XZ8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb22Q91XZ8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb22Q91XZ8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb22Q91XZ8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb22Q91XZ8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb22Q91XZ8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb22Q91XZ8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb22Q91XZ8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb22Q91XZ8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb22Q91XZ8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Pcdhb22Q91XZ8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhb22Q91XZ8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhb22Q91XZ8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Pcdhb22Q91XZ8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb22Q91XZ8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb22Q91XZ8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb22Q91XZ8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb22Q91XZ8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 Gm27463-201ENSMUST00000183569 57 ntBASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb22Q91XZ8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb22Q91XZ8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb22Q91XZ8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.16■□□□□ 0.82
Pcdhb22Q91XZ8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.16■□□□□ 0.82
Pcdhb22Q91XZ8 Gm7791-201ENSMUST00000219066 539 ntBASIC20.16■□□□□ 0.82
Pcdhb22Q91XZ8 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.16■□□□□ 0.82
Pcdhb22Q91XZ8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb22Q91XZ8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb22Q91XZ8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhb22Q91XZ8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb22Q91XZ8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb22Q91XZ8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Gm30025-201ENSMUST00000218555 728 ntBASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms