Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Gm7638-201ENSMUST00000121348 967 ntBASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb1Q91XX8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb1Q91XX8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb1Q91XX8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Gm7791-201ENSMUST00000219066 539 ntBASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb1Q91XX8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhgb1Q91XX8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Pcdhgb1Q91XX8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Pcdhgb1Q91XX8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhgb1Q91XX8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhgb1Q91XX8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb1Q91XX8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhgb1Q91XX8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms