Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhgb2Q91XX7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Gm10033-202ENSMUST00000211874 928 ntBASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb2Q91XX7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Gm2399-201ENSMUST00000104944 225 ntBASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb2Q91XX7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Zfp783-201ENSMUST00000095946 670 ntBASIC16.27■□□□□ 0.2
Pcdhgb2Q91XX7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhgb2Q91XX7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhgb2Q91XX7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhgb2Q91XX7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhgb2Q91XX7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhgb2Q91XX7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb2Q91XX7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Gm6365-201ENSMUST00000054711 744 ntBASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb2Q91XX7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms