Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 Gm13474-201ENSMUST00000122466 815 ntBASIC18.03■□□□□ 0.48
Sh3d19Q91X43 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d19Q91X43 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Sh3d19Q91X43 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d19Q91X43 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sh3d19Q91X43 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Sh3d19Q91X43 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d19Q91X43 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d19Q91X43 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d19Q91X43 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d19Q91X43 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.02■□□□□ 0.48
Sh3d19Q91X43 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d19Q91X43 Gm8969-201ENSMUST00000199694 526 ntBASIC18.02■□□□□ 0.48
Sh3d19Q91X43 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.02■□□□□ 0.48
Sh3d19Q91X43 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3d19Q91X43 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3d19Q91X43 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.01■□□□□ 0.47
Sh3d19Q91X43 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Gm6659-201ENSMUST00000174752 547 ntBASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d19Q91X43 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d19Q91X43 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Sh3d19Q91X43 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3d19Q91X43 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d19Q91X43 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d19Q91X43 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Sh3d19Q91X43 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3d19Q91X43 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d19Q91X43 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18■□□□□ 0.47
Sh3d19Q91X43 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18■□□□□ 0.47
Sh3d19Q91X43 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d19Q91X43 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d19Q91X43 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d19Q91X43 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Sh3d19Q91X43 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sh3d19Q91X43 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sh3d19Q91X43 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d19Q91X43 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d19Q91X43 Gm19439-201ENSMUST00000198195 2273 ntBASIC18■□□□□ 0.47
Sh3d19Q91X43 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sh3d19Q91X43 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.98■□□□□ 0.47
Sh3d19Q91X43 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d19Q91X43 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d19Q91X43 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d19Q91X43 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d19Q91X43 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d19Q91X43 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d19Q91X43 Gm10013-201ENSMUST00000106074 672 ntBASIC17.98■□□□□ 0.47
Sh3d19Q91X43 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.98■□□□□ 0.47
Sh3d19Q91X43 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Sh3d19Q91X43 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sh3d19Q91X43 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.98■□□□□ 0.47
Sh3d19Q91X43 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d19Q91X43 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d19Q91X43 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3d19Q91X43 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms