Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
StrcQ8VIM6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.74■□□□□ 0.91
StrcQ8VIM6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.74■□□□□ 0.91
StrcQ8VIM6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
StrcQ8VIM6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
StrcQ8VIM6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
StrcQ8VIM6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
StrcQ8VIM6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.74■□□□□ 0.91
StrcQ8VIM6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
StrcQ8VIM6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
StrcQ8VIM6 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.74■□□□□ 0.91
StrcQ8VIM6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
StrcQ8VIM6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
StrcQ8VIM6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
StrcQ8VIM6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
StrcQ8VIM6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
StrcQ8VIM6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.72■□□□□ 0.91
StrcQ8VIM6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
StrcQ8VIM6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
StrcQ8VIM6 Gm8000-201ENSMUST00000188378 592 ntBASIC20.72■□□□□ 0.91
StrcQ8VIM6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
StrcQ8VIM6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
StrcQ8VIM6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
StrcQ8VIM6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.72■□□□□ 0.91
StrcQ8VIM6 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.72■□□□□ 0.91
StrcQ8VIM6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.72■□□□□ 0.91
StrcQ8VIM6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.72■□□□□ 0.91
StrcQ8VIM6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.71■□□□□ 0.91
StrcQ8VIM6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.71■□□□□ 0.91
StrcQ8VIM6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
StrcQ8VIM6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
StrcQ8VIM6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.7■□□□□ 0.9
StrcQ8VIM6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
StrcQ8VIM6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
StrcQ8VIM6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
StrcQ8VIM6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
StrcQ8VIM6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
StrcQ8VIM6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.7■□□□□ 0.9
StrcQ8VIM6 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.7■□□□□ 0.9
StrcQ8VIM6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
StrcQ8VIM6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
StrcQ8VIM6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
StrcQ8VIM6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
StrcQ8VIM6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
StrcQ8VIM6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
StrcQ8VIM6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
StrcQ8VIM6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
StrcQ8VIM6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
StrcQ8VIM6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.69■□□□□ 0.9
StrcQ8VIM6 Gm6376-201ENSMUST00000209407 580 ntBASIC20.69■□□□□ 0.9
StrcQ8VIM6 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.69■□□□□ 0.9
StrcQ8VIM6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
StrcQ8VIM6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
StrcQ8VIM6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
StrcQ8VIM6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
StrcQ8VIM6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.69■□□□□ 0.9
StrcQ8VIM6 Gm15165-201ENSMUST00000118140 502 ntBASIC20.69■□□□□ 0.9
StrcQ8VIM6 Gm7862-201ENSMUST00000121461 292 ntBASIC20.69■□□□□ 0.9
StrcQ8VIM6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
StrcQ8VIM6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
StrcQ8VIM6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
StrcQ8VIM6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
StrcQ8VIM6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
StrcQ8VIM6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
StrcQ8VIM6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.68■□□□□ 0.9
StrcQ8VIM6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
StrcQ8VIM6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
StrcQ8VIM6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms